PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe5G188900.2.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 428aa    MW: 47517 Da    PI: 5.754
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe5G188900.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.75.6e-10237284455
                        HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  Aqcoe5G188900.2.p 237 SHSLAERVRREKISERMKYLQDLVPGC----NKITGKAGMLDEIINYVQSLQ 284
                        8**************************....999*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.28E-17231302IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.19E-10231288No hitNo description
PROSITE profilePS5088815.618233283IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.7E-17233300IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.3E-7237284IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.3E-9239289IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 428 aa     Download sequence    Send to blast
MLHCAADTMT VLERQQARQK WQQVPLLQQQ QQQQQQHQQS YFSDTHFNLL PNSSSSSQQF  60
HIMMNDDSVI RDFVNRSIKL DPSLDNNGWQ DFGKYPVSGN GFGGEINGFG VNGVDLVDYS  120
LSRTSSCPPE DVVVEAKGGE VVVAEKLGGK VGKESFKKRK AQNSKVVAEE VIRDKRMKGD  180
SEEESKVTEV NNSNSSTSNN NNKETSGDSV KENSKASGAQ KQDYIHVRAR RGQATDSHSL  240
AERVRREKIS ERMKYLQDLV PGCNKITGKA GMLDEIINYV QSLQRQVEFL SMKLAAVNPR  300
LDFNIENLFA KEMFSANTAG FPIGTSSEMA NPSAYLPLNS LQQMISNCGL DMGMNSSDIS  360
LQRTRSAPVS DAFLDTSCFT QAQPSSSAWE TDLQSLYNVE FNQTRPVTFP PQSFTGILEA  420
NNLKMEM*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1405841e-61BT140584.1 Medicago truncatula clone JCVI-FLMt-18N21 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010263637.11e-152PREDICTED: transcription factor HBI1
SwissprotQ8GY612e-61BH063_ARATH; Transcription factor bHLH63
TrEMBLM5VVW11e-146M5VVW1_PRUPE; Uncharacterized protein
STRINGVIT_03s0038g04760.t011e-144(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34530.14e-58cryptochrome-interacting basic-helix-loop-helix 1